Caulobacter Cell Cycle Control

• Home
• Introduction
• Biological background
• Model summary
• Model details
• Genetic network
• Mathematical Model
• Wiring diagram
• Equations
• Model assumptions
• Parameters
• Wild-type Simulation
• WT stalked cell
• Data comparison
• Mutants
• List of mutants
• ctrA
• gcrA
• dnaA
• ftsQ
• ftsZ
• divK
• ccrM
• DNA elongation
• Model Files
• References
• Caulobacter Labs
• Who We Are
• Dr. John Tyson's group
• Dr. Bruno Sobral's group @ VBI
• Modeling in Other Organisms
• Budding yeast model
• Generic model
• Modeling Tools
• Xpp
• JigCell
• Oscill8
• PET
• Matlab
• www.sbml.org
• Publications in Lab
• Acknowledgment and Disclaimer

How to run the models yourself

Here you can download the files necessary to run our cell cycle model.

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You can use our Online Simulator.

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Simulation files for wild-type stalked cell cycle in Caulobacter

Files for simulations with Matlab: modelwt_stalked.zip

Files for simulations with PET or other SBML simulators: modelwt_stalked.sbml

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Altered parameter values for mutant simulations

parchanged.doc

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